AsterOmics provides omics data analysis for research laboratories, universities and companies. Single cell, spatial, bulk transcriptomics, proteomics, lipidomics and metabolomics.
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Projects can start at any of the three stages below, including after the data has been generated.
Deliverables
| Report | Written analysis report covering methods, results and analytical decisions. |
| Figures | Vector files at journal resolution, with the underlying source data. |
| Methods text | Methods and statistics sections written for direct inclusion in a manuscript. |
| Code | Version-controlled repository, documented, with pinned package versions and fixed random seeds. |
| Handover | A walkthrough session so that your team can rerun the analysis independently. |
Reproducibility
Every analysis is delivered as code rather than as results alone. Package versions are pinned, environments are documented and random seeds are fixed, so that figures can be regenerated by your team, by a collaborator or by a reviewer.
Scope
| Data types | Single cell, spatial, bulk transcriptomics, proteomics, lipidomics, metabolomics, and combinations of these. |
| Platforms | 10x Genomics, Xenium, Visium, mass spectrometry, multiplex imaging. |
| Languages | R and Python. |
| Infrastructure | Analyses can be run on our infrastructure or on yours, including institutional clusters. |
Engagement
A first discussion to define the biological question, the data available or planned, and the objective. Free of charge, with the time it takes.
Scope, deliverables, timeline and price, agreed in writing before work begins. Fixed price for defined projects, hourly rate for advisory work.
Report, figures, methods text and code repository, followed by a handover session with your team.
Expertise
AsterOmics is led by Fatine Cherkaoui, PhD in Biomedical Sciences, with training in both laboratory work and bioinformatics.
Analyses are carried out by a person who knows what happens at the bench. Sample preparation, batch structure and technical artefacts are assessed as part of the analysis rather than treated as background noise.
We work with academic laboratories, core facilities and companies, on data they generate and on public datasets.
Contact
Please include the biological question, the data available or planned, and your deadline.
contact@asteromics.com